Flexibly implements Integral Projection Models using an expression based framework. This will not abstract away the model selection process, but it will make sure you get everything after that correct. It handles density dependence and environmental stochasticity, with a couple of options for implementing the latter. In addition, provides functions to avoid unintentional eviction of individuals from models. Additionally, provides model diagnostic tools, plotting functionality, stochastic/deterministic simulations, and analysis tools. Integral projection models are described in depth by Easterling et al. (2000) <doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2>, Merow et al. (2013) <doi:10.1111/2041-210X.12146>, Rees et al. (2014) <doi:10.1111/1365-2656.12178>, and Metcalf et al. (2015) <doi:10.1111/2041-210X.12405>. Williams et al. (2012) <doi:10.1890/11-2147.1> discuss the problem of unintentional eviction.
Version: | 0.0.1 |
Depends: | R (≥ 3.2.3) |
Imports: | graphics, grDevices, magrittr, methods, purrr (≥ 0.3.0), rlang (≥ 0.3.0), stats, utils, Rcpp |
LinkingTo: | Rcpp |
Suggests: | knitr, lme4, mvtnorm, rmarkdown, roxygen2, spelling, testthat, covr |
Published: | 2021-02-10 |
Author: | Sam Levin |
Maintainer: | Sam Levin <levisc8 at gmail.com> |
BugReports: | https://github.com/levisc8/ipmr/issues |
License: | MIT + file LICENSE |
URL: | https://levisc8.github.io/ipmr/, https://github.com/levisc8/ipmr |
NeedsCompilation: | yes |
Language: | en-US |
Materials: | NEWS |
CRAN checks: | ipmr results |
Reference manual: | ipmr.pdf |
Vignettes: |
Age-Size IPMs Density Dependent IPMs General IPMs Hierarchical Notation Introduction to ipmr proto_ipm Data Structure |
Package source: | ipmr_0.0.1.tar.gz |
Windows binaries: | r-devel: ipmr_0.0.1.zip, r-release: ipmr_0.0.1.zip, r-oldrel: ipmr_0.0.1.zip |
macOS binaries: | r-release: ipmr_0.0.1.tgz, r-oldrel: ipmr_0.0.1.tgz |
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