bmotif: Motif Analyses of Bipartite Networks

Counts occurrences of motifs in bipartite networks, as well as the number of times each node or link appears in each unique position within motifs. Has support for both binary and weighted motifs: can calculate the mean weight of motifs and the standard deviation of their mean weights. Intended for use in ecology, but its methods are general and can be applied to any bipartite network. Full details are given in Simmons et al. (2019) <doi:10.1111/2041-210X.13149>.

Version: 2.0.2
Depends: R (≥ 3.5.0)
Imports: tensor (≥ 1.5), Rcpp (≥ 0.12.18), reshape2 (≥ 1.4.3), gtools (≥ 3.8.1), stats (≥ 3.5.0)
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown
Published: 2020-09-11
Author: Benno Simmons [aut, cre], Michelle Sweering [aut], Maybritt Schillinger [aut], Riccardo Di Clemente [aut]
Maintainer: Benno Simmons <benno.simmons at gmail.com>
License: MIT + file LICENSE
NeedsCompilation: yes
Language: en-GB
Citation: bmotif citation info
Materials: README NEWS
CRAN checks: bmotif results

Downloads:

Reference manual: bmotif.pdf
Vignettes: bmotif motif dictionary
Package source: bmotif_2.0.2.tar.gz
Windows binaries: r-devel: bmotif_2.0.2.zip, r-release: bmotif_2.0.2.zip, r-oldrel: bmotif_2.0.2.zip
macOS binaries: r-release: bmotif_2.0.2.tgz, r-oldrel: bmotif_2.0.2.tgz
Old sources: bmotif archive

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